Published articles (with peer review)
2024
Liu, Z., Bernard, A., Wang, Y., Dirlewanger, E., Wang, X. (2024). Genomes and integrative genomic insights into the genetic architecture of main agronomic traits in the edible cherries. Horticulture Research. DOI : 10.1093/hr/uhae269
Robin, J., Bernard, A., Albouy, L., Papillon, S., Tranchand, E., Hebrard, M.-N., Philibe, J.-B., Barbedette, M., Schafleitn, S., Wenden, B., Barreneche, T., Delmas, M., Lheureux, F., Toillon, J. (2024, 2024-04-16). Description of Phenological Events of Persian Walnut (Juglans regia L.) according to the Extended BBCH Scale and Historical Scales. Horticulturae. DOI : 10.3390/horticulturae10040402
Schröpfer, S., Schuster, M., Quero-Garcia, J., López-Ortega, G., & Flachowsky, H. (2024, 2024-04-05). Synergistic approach of PCR-based fragment length analysis and amplicon deep sequencing reveals rich diversity of S-alleles in sweet cherries from the Caucasian region of origin. Frontiers in Plant Science, 15. DOI : 10.3389/fpls.2024.1355977
Walde, M., G, Wenden, B., Chuine, I., Gessler, A., Saurer, M., Vitasse, Y. (2024, 2024-02-28). Stable water isotopes reveal the onset of bud dormancy in temperate trees, whereas water content is a better proxy for dormancy release. Tree Physiology, 44(4). DOI : 10.1093/treephys/tpae028
Yu, S., Wenden, B., Ferguson, L., Tian, L. (2024, 2024-07-26). Editorial: Building climate resilient deciduous tree crops by deciphering winter dormancy. Frontiers in Plant Science, 15. DOI : 10.3389/fpls.2024.1463405
2023
Branchereau, C., Hardner, C., Dirlewanger, E., Wenden, B., Le Dantec, L., Alletru, D., Parmentier, J., Ivancic, A., Giovannini, D., Brandi, F., Lopez-Ortega, G., Garcia- Montiel, F., Quilot-Turion, B., Quero-Garcia, J. (2023) Genotype-by-environment and QTL-by-environment interactions in sweet cherry (Prunus avium L.) for flowering date. Frontiers in Plant Science, 14. DOI: 10.3389/fpls.202.1142974
Donkpegan, A., Bernard, A., Barreneche, T., Quero-Garcia, J., Bonnet, H., Fouché, M., Le Dantec, L., Wenden, B., Dirlewanger, E. (2023). Genome-wide association mapping in a sweet cherry germplasm collection ( Prunus avium L.) reveals candidate genes for fruit quality traits. Horticulture Research, 10(10), uhad191. DOI : 10.1093/hr/uhad191
Jiu, S., Chen, B., Dong, X., Lv, Z., Wang, Y., Yin, C., Xu, Y., Zhang, S., Zhu, J., Wang, J., Liu, X., Sun, W., Yang, G., Li, M., Li, S., Zhang, Z., Liu, R., Wang, L., Manzoor, M. A., Quero-Garcia, J., Wang, S., Lei, Y., Yang, L., Dirlewanger, E., Dong, Y., Zhang, C. (2023). Chromosome-scale genome assembly of Prunus pusilliflora provides novel insights into genome evolution, disease resistance, and dormancy release in Cerasus L. Horticulture Research, 10(5). DOI : 10.1093/hr/uhad062
Liu, X., Wang, J., Sun, W., Sabir, I. A., Wang, L., Lv, Z., Tang, Z., Liu, H., Liu, R., Jiu, S., Wenden, B., Zhang, C. (2023). Sweet cherry PavGA20ox-2 positive regulation of plant growth, flowering time, and seed germination. Scientia Horticulturae, 322, 112405. DOI : 10.1016/j.scienta.2023.112405
Ternjak, T., Barreneche, T., Šiško, M., Ivančič, A., Šušek, A., Quero-García, J. (2023). Genetic diversity and structure of Slovenian native germplasm of plum species (P. domestica L., P. cerasifera Ehrh. and P. spinosa L.). Frontiers in plant science, 14, 1150459. DOI : 10.3389/fpls.2023.1150459
2022
Branchereau, C., Quero-Garcia, J., Echagüe, N. H. Z., Lambelin, L., Fouché, M., Wenden, B., Donkpegan, A., Le Dantec, L., Barreneche, T., Alletru, D., Parmentier, J., Dirlewanger, E. (2022). New insights into flowering date in Prunus : fine mapping of a major QTL in sweet cherry. Horticulture Research, Online ahead of print. DOI : 10.1093/hr/uhac042
2021
Barreneche, T., Cárcamo de la Concepción, M., Blouin-Delmas, M., Ordidge, M., Nybom, H., Lacis, G., Feldmane, D., Sedlak, J., Meland, M., Kaldmäe, H., Kahu, K., Békefi, Z., Stanivuković, S., Đurić, G., Höfer, M., Galik, M., Schüller, E., Spornberger, A., Sirbu, S., Drogoudi, P., Agulheiro-Santos, A. C., Kodad, O., Vokurka, A., Lateur, M., Fernández Fernández, F., Giovannini, D., Quero-Garcia, J. (2021). SSR-Based Analysis of Genetic Diversity and Structure of Sweet Cherry (Prunus avium L.) from 19 Countries in Europe. Plants, 10, 1983. DOI : 10.3390/plants10101983
Bernard, A., Crabier, J., Donkpegan, A.S.L., Marrano, A., Lheureux, F. Dirlewanger, E. (2021) Genome-Wide Association Study Reveals Candidate Genes Involved in Fruit Trait Variation in Persian Walnut (Juglans regia L.). Frontiers in Plant Science, 11:607213. DOI : 10.3389/fpls.2020.607213
Calle, A., Grimplet, J., Le Dantec, L., Wünsch, A. (2021). Identification and Characterization of DAMs Mutations Associated With Early Blooming in Sweet Cherry, and Validation of DNA-Based Markers for Selection. Frontiers in Plant Science, 12, 621491. DOI : 10.3389/fpls.2021.621491
Lahaye, M., Tabi, W., Le Bot, L., Delaire, M., Orsel, M., Campoy, J. A., Quero-Garcia, J., Le Gall, S. (2021). Comparison of cell wall chemical evolution during the development of fruits of two contrasting quality from two members of the Rosaceae family: Apple and sweet cherry. Plant Physiology and Biochemistry, 168, 93-104. DOI : 10.1016/j.plaphy.2021.10.002
Larue, C., Barreneche, T., Petit, R., J. (2021). An intensive study plot to investigate chestnut tree reproduction. Annals of Forest Science, 78(4), 90. DOI : 10.1007/s13595-021-01104-w
Larue, C., Barreneche, T., Petit, R.J. (2021). Efficient monitoring of phenology in chestnuts. Scientia Horticulturae, 281, 109958. DOI : 10.1016/j.scienta.2021.109958
Larue, C., Guichoux, E., Laurent, B., Barreneche, T., Robin, C., Massot, M., Delcamp, A., J. Petit, R. (2021). Development of highly validated SNP markers for genetic analyses of chestnut species. Conservation Genetics Resources, Advance online publication. DOI : 10.1007/s12686-021-01220-9
Marais, A., Murolo, S., Faure, C., Brans, Y., Larue, C., Maclot, F., Massart, S., Chiumenti, M., Minafra, A., Romanazzi, G., Lefebvre, M., Barreneche, T., Robin, C., Petit, R., & Candresse, T. (2021). Sixty years from the first disease description, a novel badnavirus associated with chestnut mosaic disease. Phytopathology, just published online. https://doi.org/10.1094/phyto-09-20-0420-r
Quero-García, J., Letourmy, P., Campoy, J. A., Branchereau, C., Malchev, S., Barreneche, T., Dirlewanger, E. (2021). Multi-year analyses on three populations reveal the first stable QTLs for tolerance to rain-induced fruit cracking in sweet cherry (Prunus avium L.). Horticulture research, 8(1), 136. DOI : 10.1038/s41438-021-00571-6
2020
Bernard, A., Barreneche, T., Donkpegan, A., Lheureux, F., Dirlewanger, E. (2020). Comparison of structure analyses and core collections for the management of walnut genetic resources. Tree Genetics and Genomes 16(5) : 76. DOI : 10.1007/s11295-020-01469-5
Bernard, A., Marrano, A., Donkpegan, A., Brown, P. J., Leslie, C. A., Neale, Lheureux, F., Dirlewanger, E. (Auteur de correspondance) (2020). Association and linkage mapping to unravel genetic architecture of phenological traits and lateral bearing in Persian walnut (Juglans regia L.). BMC Genomics, 21 (1), 203. DOI : 10.1186/s12864-020-6616-y
Cirilli, M., Micali, S., Aranzana, M.J., Arus, P., Babini, A., Barreneche, T., Bink, M.C., Cantín, C., Ciacciulli,A., Cos-Terrer, J., Drogoudi, P., Eduardo, I., Foschi, S., Giovannini, D., Guerra, W., Liverani, A., Pacheco, I., Pascal, T., Quilot-Turion, B., Verde, I., Rossini L., Bassi, D. (2020). The multi-site PeachRefPop collection: a true cultural heritage and international scientific tool for fruit trees. Plant Physiology, 184 (2), 632-646. DOI : 10.1104/pp.19.01412
Darbyshire, R., Lopez, J.N., Song, X.X., Wenden, B., Close, D. (2020). Modelling cherry full bloom using 'space-for-time' across climatically diverse growing environments. Agricultural And Forest Meteorology, 284, UNSP 107901. DOI : 10.1016/j.agrformet.2020.107901
Laurent, B., Larue, C., Chancerel, E., Guichoux, E., Petit, R.J., Barreneche, T., Robin, C., Lepais, O. (2020). Microhaplotype genotyping-by-sequencing of 98 highly polymorphic markers in three chestnut tree species. Conservation Genetics Resources. DOI : 10.1007/s12686-020-01157-5
Pereira-Lorenzo, S., Bischofberger, Y., Conedera, M., Piattini, P., Crovadore, J., Chablais, R., Rudow, A., Hatt, S., Ramos-Cabrer, A.M., Barreneche,T., Lefort, F. (2020). Reservoir of the European chestnut diversity in Switzerland, Biodiversity and Conservation, Online first. DOI: 10.1007/s10531-020-01970-2
Vimont, N., Quah, F. X., Schöpfer, D. G., Roudier, F., Dirlewanger, E., Wigge, Wenden, B., Cortijo, S. (2020). ChIP-seq and RNA-seq for complex and low-abundance tree buds reveal chromatin and expression co-dynamics during sweet cherry bud dormancy. Tree Genetics and Genomes, 16 (1), 9. DOI : 10.1007/s11295-019-1395-9
Vimont, N., Schwarzenberg, A., Domijan, M., Donkpegan, A., Beauvieux, R., Dantec, L., Arkoun, M., Jamois, F., Yvin, J. C., Wigge, P.A., Dirlewanger, E., Cortijo, S., Wenden, B. (2020). Fine tuning of hormonal signaling is linked to dormancy status in sweet cherry flower buds. Tree physiology, tpaa122. DOI :10.1093/treephys/tpaa122
Wenden, B., Mariadassou, M., Chmielewski, FM., Vitasse, Y (2020). Shifts in the temperature-sensitive periods for spring phenology in European beech and pedunculate oak clones across latitudes and over recent decades. Global change biology, 26, 1808-1819. DOI : 10.1111/gcb.14918
2019
Aranzana, M. J., Decroocq, V., Dirlewanger, E., Eduardo, I., Gao, Z. S., Gasic, K., Iezzoni, A., Jung, S., Peace, C., Prieto, H., Tao, R., Verde, I., Abbott, A. G., Arús, P (2019). Prunus genetics and applications after de novo genome sequencing: achievements and prospects. Horticulture Research, 6, 58. DOI : 10.1038/s41438-019-0140-8
Beauvieux R, Wenden B, Ballias P, Christmann H, Gibon Y, Dirlewanger E (2019). Dynamic of bud metabolites during dormancy in sweet cherry genotypes with contrasted chilling requirements. Acta Horticulturae 1235:407-412. DOI: 10.17660/ActaHortic.2019.1235.56
Bernard A, Barreneche T, Delmas M, Durand S, Pommier C, Lheureux F, Tranchand E, Naudin M, Dirlewanger E (2019) The Walnut Genetic Resources of INRA: chronological phenotypic data and ontology. BMC Research Notes 12:662. https://doi.org/10.1186/s13104-019-4678-1.
Cai, L., Quero-Garcia, J., Barreneche, T., Dirlewanger, E., Saski, C., Iezzoni, A (2019). A fruit firmness QTL identified on linkage group 4 in sweet cherry (Prunus avium L.) is associated with domesticated and bred germplasm. Scientific Reports, 9 (1), 5008. DOI : 10.1038/s41598-019-41484-8
Campoy, J. A., Darbyshire, R., Dirlewanger, E., Quero-Garcia, J., Wenden, B. (2019). Yield potential definition of the chilling requirement reveals likely underestimation of the risk of climate change on winter chill accumulation. International Journal of Biometeorology, 63 (2), 183-192. DOI : 10.1007/s00484-018-1649-5
Hardner, C. M., Hayes, B. J., Kumar, S., Vanderzande, S., Cai, L., Piaskowski, J., Quero-Garcia, J., Campoy, J. A., Barreneche, T., Giovannini, D., Liverani, A., Charlot, G., Villamil-Castro, M., Oraguzie, N., Peace, C. P. (2019). Prediction of genetic value for sweet cherry fruit maturity among environments using a 6K SNP array. Horticulture Research, 6 (1). , DOI : 10.1038/s41438-018-0081-7
Pereira-Lorenzo, S., Ramos-Cabrer, A. M., Barreneche, T., Mattioni, C., Villani, F., Díaz-Hernández, B., Martín, L. M., Robles-Loma, A., Cáceres, Y., Martín, A. (2019). Instant domestication process of European chestnut cultivars. Annals of Applied Biology, 174 (1), 74-85. , DOI : 10.1111/aab.12474
Quero-García J, Campoy JA, Barreneche T, Le Dantec L, Wenden B, Fouché M, Dirlewanger E, Silva H, Cai L, Iezzoni A (2019) Present and future of marker-assisted breeding in sweet and sour cherry. Acta Horticulturae 1235:1-14 (DOI: 10.17660/Acta Hortic.2019.1235.1
Vimont, N., Fouché, M., Campoy, J. A., Tong, M., Arkoun, M., Yvin, JC., Wigge, P. A., Dirlewanger, E., Cortijo, S., Wenden, B. (2019). From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy. BMC Genomics, 20 (1), 974. DOI : 10.1186/s12864-019-6348-z
Vimont N, Beauvieux R, Arkoun M, Yvin JC, Dirlewanger E, Cortijo S, Wigge PA, Wenden B (2019) The presence of H3K4me3 histone mark is positively correlated with expression at the DAM loci in sweet cherry during dormancy. Acta Horticulturae 1235:413-420. DOI: 10.17660/ActaHortic.2019.1235.57
2018
Beauvieux, R., Wenden, B., Dirlewanger, E. (2018). Bud Dormancy in Perennial Fruit Tree Species: A Pivotal Role for Oxidative Cues. Frontiers in Plant Science, 9, 657. DOI : 10.3389/fpls.2018.00657
Bernard, A., Barreneche, T., Lheureux, F., Dirlewanger, E (2018). Analysis of genetic diversity and structure in a worldwide walnut (Juglans regia L.) germplasm using SSR markers. PloS one, 13 (11), e0208021. , DOI : 10.1371/journal.pone.0208021
Bernard, A., Lheureux, F., Dirlewanger, E. (2018). Walnut: past and future of genetic improvement. Tree Genetics and Genomes, 14 (1). DOI : 10.1007/s11295-017-1214-0
Bernard A, Dirlewanger E, Delmas M, Barreneche T (2018) INRA's Walnut Genetic Resources Observation. DOI : 10.15454/58SYJV, Portail Data Inra, V1
Ruiz, D., Egea, J., Salazar, J. A., Campoy, J. A. (2018). Chilling and heat requirements of Japanese plum cultivars for flowering. Scientia Horticulturae, 242, 164-169. , DOI : 10.1016/j.scienta.2018.07.014
Wenden B, Quero-Garcia J, Dirlewanger E, Darbyshire R (2018) A comparison of sweet cherry chilling requirements estimated using statistical and biological approaches. Acta Hortic. 1229:177-182 International Symposium on Flowering, Fruit Set and Alternate Bearing (DOI: 10.17660/ActaHortic.2018.1229.27)
2017
Aranzana Civit, M. J., Hernandez Mora, J. R., Micheletti, Micali, S., Nazzicari, N., Pacheco, I., Foschi, S., Barreneche, T., Quilot-Turion, B., Wang, L., Ma, R., Li, X., Iglesias, I., Carbó, J., Troggio, M., Banchi, Aramini, Dettori, Caprera, da Silva Linge, C., Pascal, T., Lambert, P., Gao, Verde, Bassi, Rossini, Laurens, F., Arús (2017). Exploring and exploiting phenotypic and genetic diversity in peach: identification of major genes and QTLs by GWAS. Acta Horticulturae, 1172, 419-424. DOI : 10.17660/ActaHortic.2017.1172.79
Azizi Gannouni, T., Campoy, J. A., Quero-Garcia, J., Barreneche, T., Arif, A., Albouchi, A., Ammari (2017). Dormancy related traits and adaptation of sweet cherry in Northern Africa: A case of study in two Tunisian areas. Scientia Horticulturae, 219, 272-279. DOI : 10.1016/j.scienta.2017.03.013
Del Cueto, J., Ionescu, I. A., Pičmanová, M., Gericke, O., Motawia, MS., Olsen, CE., Campoy, J. A., Dicenta, F., Møller, BL., Sánchez-Pérez, R (2017). Cyanogenic Glucosides and Derivatives in Almond and Sweet Cherry Flower Buds from Dormancy to Flowering. Frontiers in Plant Science, 8, 800. DOI : 10.3389/fpls.2017.00800
Dirlewanger, E., Campoy, J. A., Wenden, B., Castede, S., Le Dantec, L., Barreneche, T., Quero-Garcia, J. (2017). Genetic analyses of chilling requirements and flowering date in sweet cherry, two key traits for breeding programs. Acta Horticulturae, 1172, p. 299-306. DOI : 10.17660/ActaHortic.2017.1172.57
Hernández Mora, J., Micheletti, D., Bink, M., Van de Weg, W., Bassi, D., Nazzicari, N., Caprera, Dettori, M., Micali, Dirlewanger, E., Lambert, P., Pascal, T., Banchi, Troggio, Rossini, Verde, Quilot-Turion, B., Laurens, F., Arús, Aranzana (2017). Discovering peach QTLs with multiple progeny analysis. Acta Horticulturae, 1172, 405-410. DOI : 10.17660/ActaHortic.2017.1172.77
Hernández Mora, J. R., Micheletti, D., Bink, M., Van de Weg, E., Cantín, C., Nazzicari, N., Caprera, A., Dettori, M. T., Micali, Banchi, Campoy, J. A., Dirlewanger, E., Lambert, P., Pascal, T., Troggio, Bassi, D., Rossini, L., Verde, Quilot-Turion, B., Laurens, F., Arus, P., Aranzana (2017). Integrated QTL detection for key breeding traits in multiple peach progenies. BMC Genomics, 18 (1). DOI : 10.1186/s12864-017-3783-6
Lalanne-Tisne, G., Quero-Garcia, J., Lafargue, M.-D.-D., Joly, J., Fouilhaux, L., Dirlewanger, E., Costes, E., Legave, J.-M. (2017). Comparison of phenotypic methodologies to characterize chilling and heat requirements of peach and apple cultivars. Acta Horticulturae, 1172, 349-354. DOI : 10.17660/ActaHortic.2017.1172.65
Nicolas, W. J., Grison, Trépout, Gaston, A., Fouche, M., Cordelières, F. P., Oparka, K., Tilsner, J., Brocard, L., Bayer (2017). Architecture and permeability of post-cytokinesis plasmodesmata lacking cytoplasmic sleeves. Nature Plants, 3 (7), 17082. DOI : 10.1038/nplants.2017.82
Pereira-Lorenzo, S., Ramos-Cabrer, Barreneche, T., Mattioni, C., Villani, F., Díaz-Hernández, Martín, Martín, Á. (2017). Database of European chestnut cultivars and definition of a core collection using simple sequence repeats. Tree Genetics and Genomes, 13 (5), 114. DOI : 10.1007/s11295-017-1197-x
Wenden B, Barreneche T, Meland M, Blanke M,M. (2017) Harmonisation of phenology stages and selected cultivars as bioindicators for climate change. Proceedings of the Cost Cherry FA1104 WG2 Cherry Phenology, Modeling and Climate Change. Acta Horticulturae, 1162:9-13. DOI : 10.17660/ActaHortic.2017.1162.2
Wenden B, Mariadassou M, Campoy JA, Quero-Garcia J, Dirlewanger E (2017) Statistical analysis of trends in sweet cherry flowering data across Europe. Acta Horticulturae, 1160:215-220. X International Symposium on Modelling in Fruit Research and Orchard Management. DOI : 10.17660/ActaHortic.2017.1160.31
2016
Campoy, J. A., Lerigoleur Balsemin , E., Christmann, H., Beauvieux, R., Girollet, N., Quero-Garcia, J., Dirlewanger, E., Barreneche, T. (2016). . Genetic diversity, linkage disequilibrium, population structure and construction of a core collection of Prunus avium L. landraces and bred cultivars. BMC Plant Biology, 16 (1), 15 p. DOI : 10.1186/s12870-016-0712-9
Lambert, P., Campoy, J. A., Pacheco, I., Mauroux, J.-B., da Silva Linge, C., Micheletti, D., Bassi, D., Rossini, L., Dirlewanger, E., Pascal, T., Troggio, M., Aranzana, M. J., Patocchi, A., Arús, P. (2016). Identifying SNP markers tightly associated with six major genes in peach [Prunus persica (L.) Batsch] using a high-density SNP array with an objective of marker-assisted selection (MAS). Tree Genetics and Genomes, 12 (61), 1-21. DOI : 10.1007/s11295-016-1080-1
Salazar, J. A., Ruiz, D., Campoy, J. A., Tartarini, S., Dondini, L., Martínez-Gómez, P. (2016). Inheritance of reproductive phenology traits and related QTL identification in apricot. Tree Genetics and Genomes, 12 (4), 71. DOI : 10.1007/s11295-016-1027-6
Wenden, B., Campoy, J. A., Lecourt, J., López Ortega, G., Blanke, M., Radičević, S., Schüller, E., Spornberger, A., Christen, D., Magein, H., Giovannini, D., Campillo, C., Malchev, S., Peris, J. M., Meland, M., Stehr, R., Charlot, G., Quero-Garcia, J. (2016). A collection of European sweet cherry phenology data for assessing climate change. Scientific data, 3, 160108. DOI : 10.1038/sdata.2016.108
2015
Campoy, J. A., Le Dantec, L., Barreneche, T., Dirlewanger, E., Quero-Garcia, J. (2015). New insights into fruit firmness and weight control in sweet cherry. Plant Molecular Biology Reporter, 33 (4), 783-796. DOI : 10.1007/s11105-014-0773-6
Castède, S., Campoy, J. A., Le Dantec, L., Quero-Garcia, J., Barreneche, T., Wenden, B., Dirlewanger, E. (2015). Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium). PloS one, 10 (11), e0143250. DOI : 10.1371/journal.pone.0143250
2014
Andreini, L.; Garcia De Cortazar Atauri, I.; Chuine, I.; Viti, R.; Bartolini, S.; Ruiz, D.; Campoy-Corbalan, J. A.; Legave, J.-M.; Audergon, J. M., Bertuzzi, P. Understanding dormancy release in apricot flower buds (Prunus armeniaca L.) using several process-based phenological models. Agricultural and Forest Meteorology, 2014, 184, 210- 219. DOI : 10.1016/j.agrformet.2013.10.005
Castede, S.; Campoy, J. A.; Quero-Garcia, J.; Le Dantec, L.; Lafargue, M. D.; Barreneche, T.; Wenden, B.; Dirlewanger, E.(2014) Genetic determinism of phenological traits highly affected by climate change in Prunus avium: flowering date dissected into chilling and heat requirements. The New phytologist, 2014, 202 (2), 703-15. DOI : 10.1111/nph.12658
Chew, Y. H.; Wenden, B.; Flis, A.; Mengin, V.; Taylor, J.; Davey, C. L.; Tindal, C.; Thomas, H.; Ougham, H. J.; de Reffye, P.; Stitt, M.; Williams, M.; Muetzelfeldt, R.; Halliday, K. J.; Millar, A. J. Multiscale digital Arabidopsis predicts individual organ and whole-organism growth. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 2014, 111 (39), E4127-36. DOI : 10.1073/pnas.1410238111
Costes, E.; Crespel, L., Denoyes-Rothan, B.; Morel, P.; Demene, M.-N. Lauri, P.-E.; Wenden, B. Bud structure, position and fate generate various branching patterns along shoots of closely related Rosaceae species: a review. Frontiers in plant science, 2014, 5, e666. DOI : 10.3389/fpls.2014.00666
Salazar, J. A.; Ruiz, D.; Campoy, J. A.; Sánchez-Pérez, R.; Crisosto, C. H.; Martínez-García, P. J.; Blenda, A.; Jung, S.; Main, D.; Martínez-Gómez, P.; Rubio, M. Quantitative trait loci (QTL) and mendelian trait loci (MTL) analysis in prunus: a breeding perspective and beyond. Plant Molecular Biology Reporter, 2014, 32 (1), 1-18. DOI : 10.1007/s11105-013-0643-7
2013
Campoy JA, Klagges C, Quero-García J, Guzman A; Mansur L, Gratacós E, Silva H, Rosyara UR, Iezzoni A, Meisel L, Dirlewanger E (2013) Construction and comparative analyses of highly dense linkage maps of two sweet cherry intra-specific progenies of commercial cultivars. PLoS One 8(1): e54743.
De Franceschi P, Stegmeir T, Cabrera A, van der Knaap E, Rosyara UR, Sebolt AM, Dondini L, Dirlewanger E, Quero-Garcia J, Campoy JA, Iezzoni AF (2013) Cell Number Regulator genes in Prunus provide candidate genes for the control of fruit size in sweet and sour cherry. Mol Breeding 32:311-326.
Rosyara U R, Bink M CAM, van de Weg E, Zhang G, Wang D, Sebolt A, Dirlewanger E, Quero-Garcia J, Schuster M, Iezzoni AF (2013) Fruit size QTL identification and the prediction of parental QTL genotypes and breeding values in multiple pedigreed populations of sweet cherry. Mol Breeding 32:875-887.
Balbontin C, Ayala H, Bastias RM, Tapia G, Ellena M, Torres C, Yuri JA, Quero-García J, Rios JC, Silva H (2013) Cracking in sweet cherries: a comprehensive review from a physiological, molecular and genomic perspective. Chilean Journal of Agricultural Research 73: 66-72.
Books or book chapters
Quero-Garcia, J. (Editeur), Lezzoni, A. (Editeur), Pulawska, J. (Editeur), Lang, G. (Editeur) (2017). Cherries: Botany, Production and Uses. Boston, USA : CABI, 551 p.
Barreneche T, Botta R, Robin C. (2019) ‘Advances in breeding of chestnuts’ in: Achieving sustainable cultivation of tree nuts. Part 2: Improving individual types of tree nuts, Chap 12. Ed by. U Serdar and D. Fullbright. Burleigh Dodds Science Publishing Limited, Cambridge (UK)
Quero-García J, Iezzoni A , López-Ortega G, Peace C, Fouché M, Dirlewanger E, Schuster M (2019) ‘Advances and challenges in cherry breeding’ in: Achieving sustainable cultivation of temperate zone tree fruits and berries. Vol 2: Cases studies. Part 1: Stone and pome fruits. Chap 3. Ed by. G. Lang . Burleigh Dodds Science Publishing Limited, Cambridge (UK).
Iezzoni A, Wünsch A, Höfer M, Giovannini D, Jensen M, Quero-Garcia J, Campoy J A, Vovurka A, Barreneche T. (2017). Biodiversity, Germplasm Resources and Breeding Methods. In: José Quero-Garcia, Amy Lezzoni, Joanna Pulawska, Gregory Lang (Editeurs), Cherries: Botany, Production and Uses (p. 36-59). Boston, USA : CABI.
Quero-Garcia, J., Schuster, M., Lopez-Ortega, G., Charlot, G. (2017). Sweet Cherry varieties and Improvement. In: Quero-Garcia, J., Lezzoni, A., Pulawska, J., Lang, G. (Editeurs), Cherries: Botany, Production and Uses (p. 60-94). Boston, USA : CABI.
Wenden, B., Campoy, J. A., Jensen, M., Lopez-Ortega, G. (2017). Climatic Limiting Factors: Temperature. In: José Quero-Garcia, Amy Lezzoni, Joanna Pulawska, Gregory Lang (Editeurs), Cherries: Botany, Production and Uses (p. 166-188). Boston, USA : CABI.
Pereira-Lorenzo, S., Costa, R., Agnanostakis, S., Serdar, U., Yamamoto, T., Saito, T., Ramos-Cabrer, A. M., Ling, Q., Barreneche, T., Robin, C., Botta, R., Contessa, C., Conedera, M., Martin, L., Martin, A., Gomes-Laranjo, J., Villani, F., Carlson, J. (2016). Interspecific hybridization of chestnut. In: Annaliese S. Mason (Ed.), dir., Polyploidy and Hybridization for Crop Improvement (p. 377-407). Boca Raton, USA : CRC Press. DOI : 10.1201/9781315369259-16
Articles without peer review
Bernard, A., Vincent, M., Molina, J., Foussard, C., Jammes, N., Lheureux, F., Crabier, J., Delmas, M., Barreneche, T., Dirlewanger, E. (2020). Caractérisation et sélection de matériel végétal innovant du noyer. De la génomique à la sélection variétale. Infos CTIFL, 334, 1-41.
Quero-Garcia, J. (2019) Cherry breeding in the world : current analysis and future perspectives. Italus Hortus 26 (1) : 9-20.
Bernard A « La collection de noyers de l’INRA, un réservoir de diversité essentiel pour l’avenir de la filière nucicole ». Hommes & Plantes, n°106, 2018, p. 38-45.
Lheureux F, Verhaeghe A, Bernard A, Dirlewanger E, Delmas M « Recherche et développement sur la noix, des projets pour un nouvel élan ». InfosCtifl, n°342, juin 2018, p. 22-31.
Quero-Garcia, J., Roch, G., Charlot, G., Hilaire, C., Barreneche, T., Campoy, J. A., Dirlewanger, E., Le Dantec, L., Wenden, B., Audergon, J. M. (2016). Etude des déterminants génétiques et moléculaires de caractères influencés par le changement climatique chez l'abricotier et le cerisier. Innovations Agronomiques (50), 51-58. http://prodinra.inra.fr/record/358890
Dirlewanger E (2015) La génétique, une issue pour la cerise dans ce climat qui change. L’Arboriculture Fruitière 691:12-13
Dirlewanger E (2014) Adapter les cerisiers au changement climatique. L'Arboriculture Fruitière 683:18-19.
Quero-Garcia J et Dirlewanger E (2014) le cerisier vulnérable au changement climatique. Dossier Le climat qui change, que faire au jardin ? Jardin de France 632:12-14
PhD Theses
Fouché Mathieu (2019-2022) Etudes des mécanismes moléculaires impliqués dans la réponse à la température chez le cerisier doux (Prunus avium L.). Thèse Université de Bordeaux.
Branchereau Camille (2018-2021) Etude des interactions génotype x environnement de la phénologie de la floraison chez le cerisier dans un contexte de changement climatique. Thèse Université de Bordeaux.
Bernard Anthony (2017-2020) Etude des ressources génétiques du noyer en vue de la mise en œuvre d’une sélection assistée par marqueurs. Thèse Cifre Ctifl- Université de Bordeaux.
Vimont Noémie (2018) Etude de la réponse à la température de l’épigénome chez le cerisier doux. Thèse Cifre Roullier- Université de Bordeaux, 220p. Soutenue le 7 septembre 2018.
Beauvieux Rémi (2017) Etude de la dormance des bourgeons chez le cerisier doux (Prunus avium L.). Thèse Université de Bordeaux,124p. Soutenue le 15 décembre 2017.
Castède Sophie (2014) : Etude et compréhension du déterminisme génétique et moléculaire de la floraison chez le cerisier doux. Thèse Université de Bordeaux 263p. Soutenue le 11 décembre 2014.
